Chromosome-level genome assembly of the caenogastropod snail Rapana venosa

doi:10.1038/s41597-023-02459-7

	Chromosome-level genome assembly of the caenogastropod snail Rapana venosa
	Song, Hao 1,2,3; Li, Zhuoqing 1,3; Yang, Meijie 1,2,3; Shi, Pu 1,3; Yu, Zhenglin 4; Hu, Zhi 1,3; Zhou, Cong 1,3; Hu, Pengpeng 1,3; Zhang, Tao 1,2,3
发表期刊	SCIENTIFIC DATA
	2023-08-16
卷号	10 期号:1 页码:10
DOI	10.1038/s41597-023-02459-7
通讯作者	Zhang, Tao([email protected])
英文摘要	The carnivorous gastropod Rapana venosa (Valenciennes, 1846) is one of the most notorious ecological invaders worldwide. Here, we present the first high-quality chromosome-scale reference R. venosa genome obtained via PacBio sequencing, Illumina paired-end sequencing, and high-throughput chromosome conformation capture scaffolding. The assembled genome has a size of 2.30 Gb, with a scaffold N50 length of 64.63 Mb, and is anchored to 35 chromosomes. It contains 29,649 protein-coding genes, 77.22% of which were functionally annotated. Given its high heterozygosity (1.41%) and large proportion of repeat sequences (57.72%), it is one of the most complex genome assemblies. This chromosome-level genome assembly of R. venosa is an important resource for understanding molluscan evolutionary adaption and provides a genetic basis for its biological invasion control.
资助机构	National Natural Science Foundation of China ; China Agriculture Research System of MOF and MARA ; Creative Team Project of the Laboratory for Marine Ecology and Environmental Science, Qingdao National for Marine Science and Technology ; Young Elite Scientists Sponsorship Program by CAST ; Youth Innovation Promotion Association by CAS
收录类别	SCI
语种	英语
关键词[WOS]	PHYLOGENETIC ANALYSIS ; CHESAPEAKE BAY ; MURICIDAE ; VALENCIENNES ; GASTROPOD ; RNA ; PREDICTION ; ALIGNMENT ; REVEALS ; WHELK
研究领域[WOS]	Science & Technology - Other Topics
WOS记录号	WOS:001049218700003
引用统计	被引频次：4[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.yic.ac.cn/handle/133337/36869
专题	海岸带生物学与生物资源利用重点实验室海岸带生物学与生物资源利用重点实验室_海岸带生物资源高效利用研究与发展中心
通讯作者	Zhang, Tao
作者单位	1.Chinese Acad Sci, Inst Oceanol, CAS Key Lab Marine Ecol & Environm Sci, Qingdao 266071, Peoples R China 2.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Ecol & Environm Sci, Qingdao 266237, Peoples R China 3.Univ Chinese Acad Sci, Beijing 100049, Peoples R China 4.Chinese Acad Sci, Yantai Inst Coastal Zone Res, Res & Dev Ctr Efficient Utilizat Coastal Bioresour, Yantai 264003, Peoples R China
推荐引用方式 GB/T 7714	Song, Hao,Li, Zhuoqing,Yang, Meijie,et al. Chromosome-level genome assembly of the caenogastropod snail Rapana venosa[J]. SCIENTIFIC DATA,2023,10(1):10.
APA	Song, Hao.,Li, Zhuoqing.,Yang, Meijie.,Shi, Pu.,Yu, Zhenglin.,...&Zhang, Tao.(2023).Chromosome-level genome assembly of the caenogastropod snail Rapana venosa.SCIENTIFIC DATA,10(1),10.
MLA	Song, Hao,et al."Chromosome-level genome assembly of the caenogastropod snail Rapana venosa".SCIENTIFIC DATA 10.1(2023):10.